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''The Erasmus+Exchange Meeting is announced as staff training event of Czech and Bavarian academic partners in Munich. The partners will exchange information on active participation in biodiversity databases in the context of botanical collections. They will gain insights into processes and interaction with European and international aggregators of biodiversity data. Gained knowledge will help to make informed decisions about future cooperation on the biodiversity data.''
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''The [https://acro.ceu.edu/erasmus-mobility-program Erasmus+Exchange] Meeting in Munich was a staff training event of Czech and Bavarian academic partners. It followed up the action [[Flora Silvae Gabretae  – Flora des Böhmerwaldes – Květena Šumavy]] of the ETC INTERREG V program. The partners exchanged information on active participation in biodiversity databases in the context of botanical collections. They gained insights into processes and interactions with European and international aggregators of biodiversity data, especially [https://www.dissco.eu/ DiSSCo] and [https://www.gbif.org/ GBIF]. Gained knowledge will help to make informed decisions about future cooperation on the biodiversity data.''
  
 
===Participants===
 
===Participants===
  
 
Dr. Petr Novotný, Dr. Dagmar Triebel, Tanja Weibulat, Wolfgang Diewald, Dr. Julia Wellsow, Dr. Stefan Seifert, Dr. Markus Weiss
 
Dr. Petr Novotný, Dr. Dagmar Triebel, Tanja Weibulat, Wolfgang Diewald, Dr. Julia Wellsow, Dr. Stefan Seifert, Dr. Markus Weiss
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* Organisations: [https://cuni.cz/UKEN-1.html Charles University of Prague] and [https://snsb.de/en/ Bavarian Natural History Collections (SNSB)]
  
 
===Time, location ===
 
===Time, location ===
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* December 5th to December 7th, 2022
 
* December 5th to December 7th, 2022
  
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* Contact person: Dr. Dagmar Triebel, Tel. 089/17861252, email: triebel@snsb.de
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* Local contact person: Dr. Dagmar Triebel, Tel. 089/17861252, email: triebel@snsb.de
  
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* Organisation, location: [http://www.botanischestaatssammlung.de/ Botanische Staatssammlung München] and [http://www.snsb.info/ SNSB IT-Zentrum], Menzinger Str. 67, 2nd floor, Roum 232.
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* Location: [http://www.botanischestaatssammlung.de/ SNSB Botanische Staatssammlung München] with [http://www.snsb.info/ SNSB IT Center], Menzinger Str. 67, 2nd floor, Room 232.
  
 
=== General Topics and Agenda ===
 
=== General Topics and Agenda ===
  
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'''December 5th''', '''9:00''':
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'''December 5th''', '''9:00 until 16:00'''  
  
 
Petr, Tanja and Dagmar  
 
Petr, Tanja and Dagmar  
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*German GBIF node system and the role of SNSB
 
*German GBIF node system and the role of SNSB
  
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*SNSB in NFDI and DiSSCo
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*SNSB in NFDI and DiSSCo, CETAF
  
 
*TDWG standard ABCD and updates
 
*TDWG standard ABCD and updates
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*GBIF Backbone Taxonomy - nomenclatory management
 
*GBIF Backbone Taxonomy - nomenclatory management
  
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*Herbarium visit and type digitisation according JSTOR standards (14.30 p.m., guided by the curator Dr. Hajo Esser)
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*Herbarium visit and type digitisation according JSTOR standards (15.00 p.m., guided by the curator Dr. Hajo Esser)
  
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'''December 6th''':  
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'''December 6th''', '''9:30 until 15:00''' 
  
 
Petr, Julia, Wolfgang (and Dagmar)
 
Petr, Julia, Wolfgang (and Dagmar)
  
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*Flora of Bavaria, DiversityTaxonNames and BFL taxon reference list
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*Flora of Bavaria, DiversityTaxonNames and BFL taxon reference list (BFL TaxRef)
  
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*Flora of Bavaria, DiversityCollection and taxon identification
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*Flora of Bavaria, DiversityCollection and taxon identification (revision, confirmation ...., including "re-naming")
  
 
*Flora of Bavaria and GBIF (data pipelines, occurrence data and BFL taxon reference list)
 
*Flora of Bavaria and GBIF (data pipelines, occurrence data and BFL taxon reference list)
  
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*GBIF Licenses
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*GBIF Terms of use and data licenses
  
 
*TDWG prior standard POSS and further standards
 
*TDWG prior standard POSS and further standards
  
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'''December 7th''':  
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'''December 7th''', '''9:00 until 14:30'''
  
 
Petr, Stefan, Markus (and Dagmar)
 
Petr, Stefan, Markus (and Dagmar)
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*Novotný, P., Seifert, S., Rohn, M., Diewald, W., Štech, M. & Triebel, D. 2022. Software infrastructure and data pipelines established for technical interoperability within a cross-border cooperation for the flora of the Bohemian Forest. Biodiversity Data Journal 10: e87254: 1-21, https://doi.org/10.3897/BDJ.10.e87254
 
*Novotný, P., Seifert, S., Rohn, M., Diewald, W., Štech, M. & Triebel, D. 2022. Software infrastructure and data pipelines established for technical interoperability within a cross-border cooperation for the flora of the Bohemian Forest. Biodiversity Data Journal 10: e87254: 1-21, https://doi.org/10.3897/BDJ.10.e87254
  
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[https://www.florasilvaegabretae.eu/de/ Flora Silvae Gabretae]
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*SNSB Press Release: [https://snsb.de/en/grenzuberschreitender-datenfluss-flora-des-bohmerwaldes/ Cross-border data pipeline for the flora of the Bohemian Forest]
  
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[[Flora des Böhmerwaldes – Květena Šumavy – Flora Silvae Gabretae| Flora des Böhmerwaldes – Květena Šumavy – Flora Silvae Gabretae (=FSG)]]
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[https://bsm.snsb.de/nfdi4biodiversity-supersedes-gfbio/ NFDI supersedes GFBio]
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[https://www.florasilvaegabretae.eu/de/ Flora Silvae Gabretae]
  
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[https://www.nfdi4biodiversity.org/en/ NFDI4Biodiversity]
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[[Flora Silvae Gabretae – Flora des Böhmerwaldes – Květena Šumavy]]
  
 
[https://snsb.de/en/flora-von-bayern/ Flora of Bavaria at SNSB]
 
[https://snsb.de/en/flora-von-bayern/ Flora of Bavaria at SNSB]
  
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[https://wiki.bayernflora.de Bayernflora Wiki]
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[https://wiki.bayernflora.de Bayernflora Wiki] (in German) with [https://daten.bayernflora.de/de/index.php Bayernflora Data Portal (BIB)] (in German)
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[https://bsm.snsb.de/nfdi4biodiversity-supersedes-gfbio/ NFDI supersedes GFBio]
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[https://gfbio.biowikifarm.net/wiki/ISO_Standards_for_Digital_Archives ISO Standards including OAIS Reference Model for data centers/ data repositories/ data archives]
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[https://www.nfdi4biodiversity.org/en/ NFDI4Biodiversity]
  
 
[https://www.gbif.org/country/DE/summary GBIF Germany]
 
[https://www.gbif.org/country/DE/summary GBIF Germany]
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[https://www.gbif.org/country/CZ/summary GBIF Czechia]
 
[https://www.gbif.org/country/CZ/summary GBIF Czechia]
  
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[http://services.snsb.info/DTNtaxonlists/rest/v0.1/static/api-doc.html DTN Regional Taxon Lists - Rest Webservice] with [http://www.diversitymobile.net/wiki/How_to_use_the_DWB_REST_Webservice_for_Taxon_Lists How To]
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[https://www.gbif.org/participant/288#nodeAddress GBIF Associate Participant Organisation CETAF] with BioCASE installation and [https://www.gbif.org/dataset/0b0735e0-624d-4abb-abba-91a2733adea4 Herbarium PRC as data publisher], hosted by WU
  
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[http://www.diversitymobile.net/wiki/DTN_Taxon_Lists_Services  DTN Taxon Lists Services Overview]
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[https://www.gbif.org/terms GBIF Terms of use]
  
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[https://wiki.bayernflora.de/web/Taxonomische_Referenzliste_der_Gef%C3%A4%C3%9Fpflanzen_Bayerns Taxonomische Referenzliste der Gefäßpflanzen Bayerns]
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[https://www.gbif.org/event/5jJNpt1WF8W5vJeBQdVpHK/cop-15-fifteenth-meeting-of-the-parties-to-the-convention-of-biological-diversity GBIF Key messages for COP 15]
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[https://www.gbif.org/dataset/d027759f-84bc-4dfc-a5ea-b17a50793451 GBIF Checklist Dataset: Taxon list of vascular plants from Bavaria, Germany compiled in the context of the BFL project - BFL TaxRef]
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[http://services.snsb.info/DTNtaxonlists/rest/v0.1/static/api-doc.html DTN Regional Taxon Lists - Rest Webservice] with [http://www.diversitymobile.net/wiki/How_to_use_the_DWB_REST_Webservice_for_Taxon_Lists How To], including BFL TaxRef
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[http://www.diversitymobile.net/wiki/DTN_Taxon_Lists_Services  DTN Taxon Lists Services Overview], including BFL TaxRef
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[https://wiki.bayernflora.de/web/Taxonomische_Referenzliste_der_Gef%C3%A4%C3%9Fpflanzen_Bayerns Taxonomische Referenzliste der Gefäßpflanzen Bayerns], BFL TaxRef - Documentation in the Bayernflora Wiki
  
 
[https://www.gbif.org/dataset/d7dddbf4-2cf0-4f39-9b2a-bb099caae36c GBIF Backbone Taxonomy]
 
[https://www.gbif.org/dataset/d7dddbf4-2cf0-4f39-9b2a-bb099caae36c GBIF Backbone Taxonomy]
  
 
[https://www.tdwg.org/standards/ TDWG Standards]
 
[https://www.tdwg.org/standards/ TDWG Standards]
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[https://abcd.tdwg.org/xml/ TDWG Standard ABCD XML]
  
 
[https://gfbio.biowikifarm.net/wiki/Data_exchange_standards,_protocols_and_formats_relevant_for_the_collection_data_domain_within_the_GFBio_network (Meta-)Data Exchange Standards relevant for biodiversity collections in the GFBio network]
 
[https://gfbio.biowikifarm.net/wiki/Data_exchange_standards,_protocols_and_formats_relevant_for_the_collection_data_domain_within_the_GFBio_network (Meta-)Data Exchange Standards relevant for biodiversity collections in the GFBio network]
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[https://diversityworkbench.net/Portal/Diversity_Workbench_Video_Tutorials Diversity Workbench Video Tutorials with five videos explaining aspects of data transformation in the context of the ABCD standard]
  
 
[https://www.dissco.eu/de/ DISSCo Germany]
 
[https://www.dissco.eu/de/ DISSCo Germany]
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[https://www.dissco.eu/contact/ DISSCo Contact]
 
[https://www.dissco.eu/contact/ DISSCo Contact]
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[https://www.gbif.org/dataset/d027759f-84bc-4dfc-a5ea-b17a50793451 GBIF Checklist Dataset: Taxon list of vascular plants from Bavaria, Germany compiled in the context of the BFL project]
 
  
 
[https://bsm.snsb.de/sektion-forschung/jstor-global-plants-in-munich/ JSTOR Global Plants in Munich]
 
[https://bsm.snsb.de/sektion-forschung/jstor-global-plants-in-munich/ JSTOR Global Plants in Munich]
  
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SNSB Press Release: [https://snsb.de/en/grenzuberschreitender-datenfluss-flora-des-bohmerwaldes/ Cross-border data pipeline for the flora of the Bohemian Forest]
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[https://cetaf.org/ CETAF Consortium of European Taxonomic Facilities]
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[https://cetaf.org/community/our-members/ CETAF Members]
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[http://www.snsb.info/SNSBInfoOpenWiki/Wiki.jsp?page=Expert%20Workshop%20on%20GBIF%20Data Expert Workshop on GBIF Data in Kenya]
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[http://www.snsb.info/SNSBInfoOpenWiki/Wiki.jsp?page=Expert%20Workshop%20on%20GBIF%20Data Expert Workshop on GBIF Data in Kenya - Materials and Documents]

Aktuelle Version vom 30. Dezember 2022, 15:34 Uhr

The Erasmus+Exchange Meeting in Munich was a staff training event of Czech and Bavarian academic partners. It followed up the action Flora Silvae Gabretae – Flora des Böhmerwaldes – Květena Šumavy of the ETC INTERREG V program. The partners exchanged information on active participation in biodiversity databases in the context of botanical collections. They gained insights into processes and interactions with European and international aggregators of biodiversity data, especially DiSSCo and GBIF. Gained knowledge will help to make informed decisions about future cooperation on the biodiversity data.

Participants

Dr. Petr Novotný, Dr. Dagmar Triebel, Tanja Weibulat, Wolfgang Diewald, Dr. Julia Wellsow, Dr. Stefan Seifert, Dr. Markus Weiss

Time, location

  • December 5th to December 7th, 2022
  • Local contact person: Dr. Dagmar Triebel, Tel. 089/17861252, email: triebel@snsb.de

General Topics and Agenda

December 5th, 9:00 until 16:00

Petr, Tanja and Dagmar

  • Bavarian Natural History Collections (SNSB), Botanische Staatssammlung München with herbarium and SNSB IT Center
  • German GBIF node system and the role of SNSB
  • SNSB in NFDI and DiSSCo, CETAF
  • TDWG standard ABCD and updates
  • GBIF Backbone Taxonomy - nomenclatory management
  • Herbarium visit and type digitisation according JSTOR standards (15.00 p.m., guided by the curator Dr. Hajo Esser)

December 6th, 9:30 until 15:00

Petr, Julia, Wolfgang (and Dagmar)

  • Flora of Bavaria, DiversityTaxonNames and BFL taxon reference list (BFL TaxRef)
  • Flora of Bavaria, DiversityCollection and taxon identification (revision, confirmation ...., including "re-naming")
  • Flora of Bavaria and GBIF (data pipelines, occurrence data and BFL taxon reference list)
  • GBIF Terms of use and data licenses
  • TDWG prior standard POSS and further standards

December 7th, 9:00 until 14:30

Petr, Stefan, Markus (and Dagmar)

  • DiversityCollection and ABCD Export for GBIF
  • DiversityTaxonNames and DTN Rest API
  • DiversityTaxonNames and GBIF checklists publications
  • GBIF Backbone Taxonomy - nomenclatory management

References and Web links

  • Novotný, P., Seifert, S., Rohn, M., Diewald, W., Štech, M. & Triebel, D. 2022. Software infrastructure and data pipelines established for technical interoperability within a cross-border cooperation for the flora of the Bohemian Forest. Biodiversity Data Journal 10: e87254: 1-21, https://doi.org/10.3897/BDJ.10.e87254

Flora Silvae Gabretae

Flora Silvae Gabretae – Flora des Böhmerwaldes – Květena Šumavy

Flora of Bavaria at SNSB

Bayernflora Wiki (in German) with Bayernflora Data Portal (BIB) (in German)

NFDI supersedes GFBio

ISO Standards including OAIS Reference Model for data centers/ data repositories/ data archives

NFDI4Biodiversity

GBIF Germany

GBIF Czechia

GBIF Associate Participant Organisation CETAF with BioCASE installation and Herbarium PRC as data publisher, hosted by WU

GBIF Terms of use

GBIF Key messages for COP 15

GBIF Checklist Dataset: Taxon list of vascular plants from Bavaria, Germany compiled in the context of the BFL project - BFL TaxRef

DTN Regional Taxon Lists - Rest Webservice with How To, including BFL TaxRef

DTN Taxon Lists Services Overview, including BFL TaxRef

Taxonomische Referenzliste der Gefäßpflanzen Bayerns, BFL TaxRef - Documentation in the Bayernflora Wiki

GBIF Backbone Taxonomy

TDWG Standards

TDWG Standard ABCD XML

(Meta-)Data Exchange Standards relevant for biodiversity collections in the GFBio network

Diversity Workbench Video Tutorials with five videos explaining aspects of data transformation in the context of the ABCD standard

DISSCo Germany

Research Infrastructure Landscape (DISSCo view)

DISSCo Contact

JSTOR Global Plants in Munich

CETAF Consortium of European Taxonomic Facilities

CETAF Members


Expert Workshop on GBIF Data in Kenya - Materials and Documents

Von „https://wiki.bayernflora.de/w/index.php?title=Erasmus%2BExchange-Meeting-2022&oldid=27754“