View source for Erasmus+Exchange-Meeting-2022


''The [https://acro.ceu.edu/erasmus-mobility-program Erasmus+Exchange] Meeting in Munich was a staff training event of Czech and Bavarian academic partners. It followed up the action [[Flora Silvae Gabretae  – Flora des Böhmerwaldes – Květena Šumavy]] of the ETC INTERREG V program. The partners exchanged information on active participation in biodiversity databases in the context of botanical collections. They gained insights into processes and interactions with European and international aggregators of biodiversity data, especially [https://www.dissco.eu/ DiSSCo] and [https://www.gbif.org/ GBIF]. Gained knowledge will help to make informed decisions about future cooperation on the biodiversity data.''

===Participants===

Dr. Petr Novotný, Dr. Dagmar Triebel, Tanja Weibulat, Wolfgang Diewald, Dr. Julia Wellsow, Dr. Stefan Seifert, Dr. Markus Weiss

* Organisations: [https://cuni.cz/UKEN-1.html Charles University of Prague] and [https://snsb.de/en/ Bavarian Natural History Collections (SNSB)]

===Time, location ===

* December 5th to December 7th, 2022

* Local contact person: Dr. Dagmar Triebel, Tel. 089/17861252, email: triebel@snsb.de

* Location: [http://www.botanischestaatssammlung.de/ SNSB Botanische Staatssammlung München] with [http://www.snsb.info/ SNSB IT Center], Menzinger Str. 67, 2nd floor, Room 232.

=== General Topics and Agenda ===

'''December 5th''', '''9:00 until 16:00''' 

Petr, Tanja and Dagmar 

*Bavarian Natural History Collections (SNSB), Botanische Staatssammlung München with herbarium and SNSB IT Center

*German GBIF node system and the role of SNSB

*SNSB in NFDI and DiSSCo, CETAF

*TDWG standard ABCD and updates

*GBIF Backbone Taxonomy - nomenclatory management

*Herbarium visit and type digitisation according JSTOR standards (15.00 p.m., guided by the curator Dr. Hajo Esser)

'''December 6th''', '''9:30 until 15:00'''  

Petr, Julia, Wolfgang (and Dagmar)

*Flora of Bavaria, DiversityTaxonNames and BFL taxon reference list (BFL TaxRef)

*Flora of Bavaria, DiversityCollection and taxon identification (revision, confirmation ...., including "re-naming")

*Flora of Bavaria and GBIF (data pipelines, occurrence data and BFL taxon reference list)

*GBIF Terms of use and data licenses

*TDWG prior standard POSS and further standards

'''December 7th''', '''9:00 until 14:30'''

Petr, Stefan, Markus (and Dagmar)

*DiversityCollection and ABCD Export for GBIF

*DiversityTaxonNames and DTN Rest API

*DiversityTaxonNames and GBIF checklists publications

*GBIF Backbone Taxonomy - nomenclatory management

===References and Web links===

*Novotný, P., Seifert, S., Rohn, M., Diewald, W., Štech, M. & Triebel, D. 2022. Software infrastructure and data pipelines established for technical interoperability within a cross-border cooperation for the flora of the Bohemian Forest. Biodiversity Data Journal 10: e87254: 1-21, https://doi.org/10.3897/BDJ.10.e87254

*SNSB Press Release: [https://snsb.de/en/grenzuberschreitender-datenfluss-flora-des-bohmerwaldes/ Cross-border data pipeline for the flora of the Bohemian Forest]

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[https://www.florasilvaegabretae.eu/de/ Flora Silvae Gabretae]

[[Flora Silvae Gabretae – Flora des Böhmerwaldes – Květena Šumavy]]

[https://snsb.de/en/flora-von-bayern/ Flora of Bavaria at SNSB]

[https://wiki.bayernflora.de Bayernflora Wiki] (in German) with [https://daten.bayernflora.de/de/index.php Bayernflora Data Portal (BIB)] (in German)

[https://bsm.snsb.de/nfdi4biodiversity-supersedes-gfbio/ NFDI supersedes GFBio]

[https://gfbio.biowikifarm.net/wiki/ISO_Standards_for_Digital_Archives ISO Standards including OAIS Reference Model for data centers/ data repositories/ data archives]

[https://www.nfdi4biodiversity.org/en/ NFDI4Biodiversity]

[https://www.gbif.org/country/DE/summary GBIF Germany]

[https://www.gbif.org/country/CZ/summary GBIF Czechia]

[https://www.gbif.org/participant/288#nodeAddress GBIF Associate Participant Organisation CETAF] with BioCASE installation and [https://www.gbif.org/dataset/0b0735e0-624d-4abb-abba-91a2733adea4 Herbarium PRC as data publisher], hosted by WU

[https://www.gbif.org/terms GBIF Terms of use]

[https://www.gbif.org/event/5jJNpt1WF8W5vJeBQdVpHK/cop-15-fifteenth-meeting-of-the-parties-to-the-convention-of-biological-diversity GBIF Key messages for COP 15]

[https://www.gbif.org/dataset/d027759f-84bc-4dfc-a5ea-b17a50793451 GBIF Checklist Dataset: Taxon list of vascular plants from Bavaria, Germany compiled in the context of the BFL project - BFL TaxRef]

[http://services.snsb.info/DTNtaxonlists/rest/v0.1/static/api-doc.html DTN Regional Taxon Lists - Rest Webservice] with [http://www.diversitymobile.net/wiki/How_to_use_the_DWB_REST_Webservice_for_Taxon_Lists How To], including BFL TaxRef

[http://www.diversitymobile.net/wiki/DTN_Taxon_Lists_Services  DTN Taxon Lists Services Overview], including BFL TaxRef

[https://wiki.bayernflora.de/web/Taxonomische_Referenzliste_der_Gef%C3%A4%C3%9Fpflanzen_Bayerns Taxonomische Referenzliste der Gefäßpflanzen Bayerns], BFL TaxRef - Documentation in the Bayernflora Wiki

[https://www.gbif.org/dataset/d7dddbf4-2cf0-4f39-9b2a-bb099caae36c GBIF Backbone Taxonomy]

[https://www.tdwg.org/standards/ TDWG Standards]

[https://abcd.tdwg.org/xml/ TDWG Standard ABCD XML]

[https://gfbio.biowikifarm.net/wiki/Data_exchange_standards,_protocols_and_formats_relevant_for_the_collection_data_domain_within_the_GFBio_network (Meta-)Data Exchange Standards relevant for biodiversity collections in the GFBio network]

[https://diversityworkbench.net/Portal/Diversity_Workbench_Video_Tutorials Diversity Workbench Video Tutorials with five videos explaining aspects of data transformation in the context of the ABCD standard]

[https://www.dissco.eu/de/ DISSCo Germany]

[https://www.dissco.eu/dissco/ri-landscape/ Research Infrastructure Landscape (DISSCo view)]

[https://www.dissco.eu/contact/ DISSCo Contact]

[https://bsm.snsb.de/sektion-forschung/jstor-global-plants-in-munich/ JSTOR Global Plants in Munich]

[https://cetaf.org/ CETAF Consortium of European Taxonomic Facilities]

[https://cetaf.org/community/our-members/ CETAF Members]


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[http://www.snsb.info/SNSBInfoOpenWiki/Wiki.jsp?page=Expert%20Workshop%20on%20GBIF%20Data Expert Workshop on GBIF Data in Kenya - Materials and Documents]