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FSG-Treffen 19-11-20

Aus Flora von Bayern
Version vom 25. November 2019, 11:25 Uhr von imported>Wolfgang Diewald (→Minutes)

FSG Technical Meeting

The meeting will focus an technical issues concerning data pipelines and web presentations of the project Flora des Böhmerwaldes – Květena Šumavy – Flora Silvae Gabretae (=FSG)

Participants

Wolfgang Diewald, Eva Holá, Petr Novotný, Martin Rohn, Marcel Ruff, Stefan Seifert, Milan Štech, Dagmar Triebel, Tanja Weibulat, Markus Weiss

Venue

SNSB IT-Zentrum
Botanische Staatssammlung München
Menzinger Str. 67
right wing of the building, groundfloor, room no. 035.
80638 München

  • Contact: Wolfgang Diewald (diewaldatsnsb.de), Tel. 089/17861253 or Dagmar Triebel (triebelatsnsb.de), Tel. 089/17861252


Getting there:

  • From Munich airport (duration about 60 min): Take S1 in the direction of 'München Hauptbahnhof'. There is a 'S-Bahn' every 20 minutes. Get off the train at the stop 'Moosach'. All stops can be found on the map 'S-Bahn, U-Bahn und Regionalzug im MVV'. At Moosach station take bus no. 51 in the direction 'Aidenbachstraße' (there is a bus every 10 minutes) and get off at 'Maria-Ward-Straße'. From here you can walk the 400 m along Menzingerstraße or otherwise take bus line 17 (direction Amalienburgstraße) and get off one stop later ('Botanischer Garten München-Nymphenburg'). Details are given under MVV Fahrplanauskunft.
  • From Munich main station (duration about 30 min): Start at 'Hauptbahnhof Süd' by taking bus 17 to 'Amalienburgstraße'. There is a bus every 10 min. Get of the bus at 'Botanischer Garten München-Nymphenburg'. Details are given under MVV Fahrplanauskunft.

WLAN: Snsb_IT_Center_4

Agenda

TOP 1 Status quo: data mobilisation (generation of new data, processing of historical data)

  • Czech partners
    • number of records in PLADIAS: 605.000
    • number of records 2019 for Czech side: 20.000 (will be imported in spring)
    • in PLADIAS only data of Czech Republic and within a very small range outside the borders of Czech Republic can be managed; thus there are not very much datasets from Bavarian side kept in PLADIAS; SNSB IT-Center will get an export of data from Bavarian side as precise as possible due to license regulations
    • Further data not kept in PLADIAS from Bavarian sied (e. g. by M. Lepši & P. Lepši) is existing. They will be prepared and delivered to Marcel (CC: Tanja Weibulat and Wolfgang Diewald). They could be provided as shown in PLADIAS template tables.


  • Bavarian partners
    • number of records in DiversityCollection: 316.000 (< 12.000 with point coordinates)
    • number of records 2019 for the Bavarian forest region (FSG project): 7490, all with point coordinates; incl. 496 from Czech side; Czech data will be exported and given to Milan Štech and Zdenek Kaplan, they will not be imported in PLADIAS, but visualized in the common maps)
    • number of records 2019 for the Bavarian forest region (Klotz, ...): ?
    • number of historical records to be processed in 2020 (Nationalpark Bayerischer Wald): 50.000
    • number of historical records to be quality-improved in 2020 (Florein database Diewald --> updating existing records): 80.000


TOP 2 Status quo: occurrence data processing until data provision

(technical improvements, ABCD mapping, withhold of data not assigned to taxref-numbers)


  • Czech partners
  • Bavarian partners
    • In the future only taxa which are hosted in BFLnames will be exported. The suggestion to provide an export only with data converted to accepted names, would make a separate export and a new data pipeline necessary.
    • Export package will be provided with taxon-ID, ABCD-handling will be improved, REST-webservice provides taxon-ID
    • Proposal: same export as now, but but with ID (identification/references-field
    • “Unschärfe” (indistinctness?) will be exported in future; it will be shown in exact value (meters) and as text (value for quadrant) ###eigentlich geht es hier um die Genauikeit von Punktkoordinaten einerseits und die Quadranten-Unschärfe andererseits###
    • as an example of “Unschärfe” concerning quadrants see Daten der Biotopkartierung
    • accuracy of coordinates will be shown in exaxt value (meters)


TOP 3 Status quo: on management of taxonomic backbones

(challenge: names with p.p. concepts (1.400 datasets)###

  • Czech partners
    • FSG consensus backbone of taxa for PLADIAS map presentation is hosted by Milan Štech
  • Bavarian partners
    • number of BFL taxref entities for the Bavarian forest region: 1736 accepted names (1255 on species rank)


TOP 4 Status quo: on common web presentation of the project


TOP 5 Status quo: "in situ" floristic status categories and processing

  • Czech partners
  • Bavarian partners
    • see "translation" table under "Useful links", improvement of processing and documentation planned


TOP 6 To Dos and priorities incl. concept for a data paper?


AOB

(Internal) documentation of FSG related data pipelines and data flows?



Minutes

Responsible for minutes: Wolfgang Diewald, Marcel Ruff

TOP 1 Status quo: data mobilisation (generation of new data, processing of historical data)

  • Czech partners
    • number of records in PLADIAS: 605.000
    • number of records 2019 for Czech side: 20.000 (will be imported in spring)
    • in PLADIAS only data of Czech Republic and within a very small range outside the borders of Czech Republic can be managed; thus there are not very much datasets from Bavarian side kept in PLADIAS; SNSB IT-Center will get an export of data from Bavarian side as precise as possible due to license regulations
    • Further data not kept in PLADIAS from Bavarian sied (e. g. by M. Lepši & P. Lepši) is existing. They will be prepared and delivered to Marcel (CC: Tanja Weibulat and Wolfgang Diewald). They could be provided as shown in PLADIAS template tables.


  • Bavarian partners
    • number of records in DiversityCollection: 316.000 (< 12.000 with point coordinates)
    • number of records 2019 for the Bavarian forest region (FSG project): 7490, all with point coordinates; incl. 496 from Czech side; Czech data will be exported and given to Milan Štech and Zdenek Kaplan, they will not be imported in PLADIAS, but visualized in the common maps)
    • number of records 2019 for the Bavarian forest region (Klotz, ...): ?
    • number of historical records to be processed in 2020 (Nationalpark Bayerischer Wald): 50.000
    • number of historical records to be quality-improved in 2020 (Florein database Diewald --> updating existing records): 80.000


TOP 2 Status quo: occurrence data processing until data provision

(technical improvements, ABCD mapping, withhold of data not assigned to taxref-numbers)


  • Czech partners
  • Bavarian partners
    • In the future only taxa which are hosted in BFLnames will be exported. The suggestion to provide an export only with data converted to accepted names, would make a separate export and a new data pipeline necessary.
    • Export package will be provided with taxon-ID, ABCD-handling will be improved, REST-webservice provides taxon-ID
    • Proposal: same export as now, but but with ID (identification/references-field
    • “Unschärfe” (indistinctness?) will be exported in future; it will be shown in exact value (meters) and as text (value for quadrant) ###eigentlich geht es hier um die Genauikeit von Punktkoordinaten einerseits und die Quadranten-Unschärfe andererseits###
    • as an example of “Unschärfe” concerning quadrants see Daten der Biotopkartierung
    • accuracy of coordinates will be shown in exaxt value (meters)


TOP 3 Status quo: on management of taxonomic backbones

(challenge: names with p.p. concepts (1.400 datasets)###

  • Czech partners
    • FSG consensus backbone of taxa for PLADIAS map presentation is hosted by Milan Štech
  • Bavarian partners
    • number of BFL taxref entities for the Bavarian forest region: 1736 accepted names (1255 on species rank)


TOP 4 Status quo: on common web presentation of the project

website in progress text will be in German an Czech descriptons in Czech then translated (10 people Czech side, 2 Bavarian), would it be possible to do it in DiversityDescription: flexible data model, characters can be defined

example: link to wiki quiz, www.deemy.de german side should make suggestions for improvement of website (verweisen auf link projektbeschreibung in bayernwiki) wenn tschechen mit der Hauptseite fertig, dann warden wir informiert (Koordination Diewald) hauptarbeit Straubinger


TOP 5 Status quo: "in situ" floristic status categories and processing

  • Czech partners
  • Bavarian partners
    • see "translation" table under "Useful links", improvement of processing and documentation planned


TOP 6 To Dos and priorities incl. concept for a data paper?


AOB

(Internal) documentation of FSG related data pipelines and data flows?


Useful links