FSG-Treffen 19-11-20: Unterschied zwischen den Versionen
imported>Wolfgang Diewald |
imported>Wolfgang Diewald |
||
| Zeile 91: | Zeile 91: | ||
**in PLADIAS only data of Czech Republic and within a very small range outside the borders of Czech Republic can be managed; thus there are not very much datasets from Bavarian side kept in PLADIAS; SNSB IT-Center will get an export of data from Bavarian side as precise as possible due to license regulations | **in PLADIAS only data of Czech Republic and within a very small range outside the borders of Czech Republic can be managed; thus there are not very much datasets from Bavarian side kept in PLADIAS; SNSB IT-Center will get an export of data from Bavarian side as precise as possible due to license regulations | ||
**Further data not kept in PLADIAS from Bavarian sied (e. g. by M. Lepši & P. Lepši) is existing. They will be prepared and delivered to Marcel (CC: Tanja Weibulat and Wolfgang Diewald). They could be provided as shown in PLADIAS [https://drive.google.com/drive/folders/1QbEW1DasBKEMkEafX64g9--B7fFlgNN5 template tables]. | **Further data not kept in PLADIAS from Bavarian sied (e. g. by M. Lepši & P. Lepši) is existing. They will be prepared and delivered to Marcel (CC: Tanja Weibulat and Wolfgang Diewald). They could be provided as shown in PLADIAS [https://drive.google.com/drive/folders/1QbEW1DasBKEMkEafX64g9--B7fFlgNN5 template tables]. | ||
* Bavarian partners | * Bavarian partners | ||
| Zeile 104: | Zeile 103: | ||
(technical improvements, ABCD mapping, withhold of data not assigned to taxref-numbers) | (technical improvements, ABCD mapping, withhold of data not assigned to taxref-numbers) | ||
*Czech partners | *Czech partners | ||
Version vom 25. November 2019, 11:29 Uhr
FSG Technical Meeting
The meeting will focus an technical issues concerning data pipelines and web presentations of the project Flora des Böhmerwaldes – Květena Šumavy – Flora Silvae Gabretae (=FSG)
Participants
Wolfgang Diewald, Eva Holá, Petr Novotný, Martin Rohn, Marcel Ruff, Stefan Seifert, Milan Štech, Dagmar Triebel, Tanja Weibulat, Markus Weiss
Venue
SNSB IT-Zentrum
Botanische Staatssammlung München
Menzinger Str. 67
right wing of the building, groundfloor, room no. 035.
80638 München
- November 20th, 2019, Start: 11:00 a.m., Lunch: 1:00 p.m. (in the Café of the Botanical Garden) , End: approx. 5:00 p.m.
- Contact: Wolfgang Diewald (diewald
snsb.de), Tel. 089/17861253 or Dagmar Triebel (triebel
snsb.de), Tel. 089/17861252
Getting there:
- From Munich airport (duration about 60 min): Take S1 in the direction of 'München Hauptbahnhof'. There is a 'S-Bahn' every 20 minutes. Get off the train at the stop 'Moosach'. All stops can be found on the map 'S-Bahn, U-Bahn und Regionalzug im MVV'. At Moosach station take bus no. 51 in the direction 'Aidenbachstraße' (there is a bus every 10 minutes) and get off at 'Maria-Ward-Straße'. From here you can walk the 400 m along Menzingerstraße or otherwise take bus line 17 (direction Amalienburgstraße) and get off one stop later ('Botanischer Garten München-Nymphenburg'). Details are given under MVV Fahrplanauskunft.
- From Munich main station (duration about 30 min): Start at 'Hauptbahnhof Süd' by taking bus 17 to 'Amalienburgstraße'. There is a bus every 10 min. Get of the bus at 'Botanischer Garten München-Nymphenburg'. Details are given under MVV Fahrplanauskunft.
WLAN:
Snsb_IT_Center_4
Agenda
TOP 1 Status quo: data mobilisation (generation of new data, processing of historical data)
- Czech partners
- Bavarian partners
TOP 2 Status quo: occurrence data processing until data provision
(technical improvements, ABCD mapping, withhold of data not assigned to taxref-numbers)
- Czech partners
- Bavarian partners
TOP 3 Status quo: on management of taxonomic backbones
(challenge: names with p.p. concepts (1.400 datasets), FSG consensus backbone of taxa?
- Czech partners
- Bavarian partners
- number of BFL taxref entities for the Bavarian forest region: 1736 accepted names (1255 on species rank)
TOP 4 Status quo: on common web presentation of the project
TOP 5 Status quo: "in situ" floristic status categories and processing
- Czech partners
- Bavarian partners
- see "translation" table under "Useful links", improvement of processing and documentation planned
TOP 6 To Dos and priorities
incl. concept for a data paper?
AOB
(Internal) documentation of FSG related data pipelines and data flows?
Minutes
Responsible for minutes: Wolfgang Diewald, Marcel Ruff
TOP 1 Status quo: data mobilisation (generation of new data, processing of historical data)
- Czech partners
- number of records in PLADIAS: 605.000
- number of records 2019 for Czech side: 20.000 (will be imported in spring)
- in PLADIAS only data of Czech Republic and within a very small range outside the borders of Czech Republic can be managed; thus there are not very much datasets from Bavarian side kept in PLADIAS; SNSB IT-Center will get an export of data from Bavarian side as precise as possible due to license regulations
- Further data not kept in PLADIAS from Bavarian sied (e. g. by M. Lepši & P. Lepši) is existing. They will be prepared and delivered to Marcel (CC: Tanja Weibulat and Wolfgang Diewald). They could be provided as shown in PLADIAS template tables.
- Bavarian partners
- number of records in DiversityCollection: 316.000 (< 12.000 with point coordinates)
- number of records 2019 for the Bavarian forest region (FSG project): 7490, all with point coordinates; incl. 496 from Czech side; Czech data will be exported and given to Milan Štech and Zdenek Kaplan, they will not be imported in PLADIAS, but visualized in the common maps)
- number of records 2019 for the Bavarian forest region (Klotz, ...): ?
- number of historical records to be processed in 2020 (Nationalpark Bayerischer Wald): 50.000
- number of historical records to be quality-improved in 2020 (Florein database Diewald --> updating existing records): 80.000
TOP 2 Status quo: occurrence data processing until data provision
(technical improvements, ABCD mapping, withhold of data not assigned to taxref-numbers)
- Czech partners
- Bavarian partners
- In the future only taxa which are hosted in BFLnames will be exported. The suggestion to provide an export only with data converted to accepted names, would make a separate export and a new data pipeline necessary.
- Export package will be provided with taxon-ID, ABCD-handling will be improved, REST-webservice provides taxon-ID
- Proposal: same export as now, but but with ID (identification/references-field
- “Unschärfe” (indistinctness?) will be exported in future; it will be shown in exact value (meters) and as text (value for quadrant) ###eigentlich geht es hier um die Genauikeit von Punktkoordinaten einerseits und die Quadranten-Unschärfe andererseits###
- as an example of “Unschärfe” concerning quadrants see Daten der Biotopkartierung
- accuracy of coordinates will be shown in exaxt value (meters)
TOP 3 Status quo: on management of taxonomic backbones
(challenge: names with p.p. concepts (1.400 datasets)###
- Czech partners
- FSG consensus backbone of taxa for PLADIAS map presentation is hosted by Milan Štech
- Bavarian partners
- number of BFL taxref entities for the Bavarian forest region: 1736 accepted names (1255 on species rank)
TOP 4 Status quo: on common web presentation of the project
website in progress text will be in German an Czech descriptons in Czech then translated (10 people Czech side, 2 Bavarian), would it be possible to do it in DiversityDescription: flexible data model, characters can be defined
example: link to wiki quiz, www.deemy.de german side should make suggestions for improvement of website (verweisen auf link projektbeschreibung in bayernwiki) wenn tschechen mit der Hauptseite fertig, dann warden wir informiert (Koordination Diewald) hauptarbeit Straubinger
TOP 5 Status quo: "in situ" floristic status categories and processing
- Czech partners
- Bavarian partners
- see "translation" table under "Useful links", improvement of processing and documentation planned
TOP 6 To Dos and priorities
incl. concept for a data paper?
AOB
(Internal) documentation of FSG related data pipelines and data flows?
Useful links
- FSG-Treffen 19-04-12: last project meeting of Bavarian FSG partners
- https://fsg.ibot.cas.cz/map/fsg/ (with login)
- http://www.florasilvaegabretae.eu/
- How to use the DWB REST Webservice for Taxon Lists (e.g., with "ex situ" floristic status for Bavaria)
- DWB BioCASe Data Pipeline with
- http://biocase.snsb.info/wrapper/downloads/BFLportal01coll/ = occurrence data mobilised by the "AG Flora von Bayern" and provided by the SNSB; see http://biocase.snsb.info/wrapper/dsa_info.cgi?dsa=BFLportal01coll (e.g., with "in situ" floristic status: original and processed)
- http://biocase.snsb.info/wrapper/downloads/BFLportal04coll/ = occurrence data generated by the Bavarian environmental agency "LfU" and provided by the SNSB; see http://biocase.snsb.info/wrapper/dsa_info.cgi?dsa=BFLportal04coll
- ABCD 2.1 schema
- Floristic Status: Categories in DiversityCollection and PLADIAS
- Data flow of occurrence data in the Flora of Bavaria context
- Daten der Biotopkartierung des Bayerischen Landesamts für Umwelt für die Flora von Bayern, calculations to aggregate shape data from biotope monitoring projects and visualise them as central points in MTB/Q grid rasters
- Biodiversity Data Journal Data Papers
- DiversityDescriptions; see also Heilpflanzen-Quiz, DEEMY and LIAS