FSG-Treffen 19-11-20

FSG Technical Meeting

The meeting will focus an technical issues concerning data pipelines and web presentations of the project Flora des Böhmerwaldes – Květena Šumavy – Flora Silvae Gabretae (=FSG)

Participants

Wolfgang Diewald, Eva Holá, Petr Novotný, Martin Rohn, Marcel Ruff, Stefan Seifert, Milan Štech, Dagmar Triebel, Tanja Weibulat, Markus Weiss

Venue

SNSB IT-Zentrum
Botanische Staatssammlung München
Menzinger Str. 67
right wing of the building, groundfloor, room no. 035.
80638 München

• November 20th, 2019, Start: 11:00 a.m., Lunch: 1:00 p.m. (in the Café of the Botanical Garden) , End: approx. 5:00 p.m.

• Contact: Wolfgang Diewald (diewaldsnsb.de), Tel. 089/17861253 or Dagmar Triebel (triebelsnsb.de), Tel. 089/17861252

Getting there:

• From Munich airport (duration about 60 min): Take S1 in the direction of 'München Hauptbahnhof'. There is a 'S-Bahn' every 20 minutes. Get off the train at the stop 'Moosach'. All stops can be found on the map 'S-Bahn, U-Bahn und Regionalzug im MVV'. At Moosach station take bus no. 51 in the direction 'Aidenbachstraße' (there is a bus every 10 minutes) and get off at 'Maria-Ward-Straße'. From here you can walk the 400 m along Menzingerstraße or otherwise take bus line 17 (direction Amalienburgstraße) and get off one stop later ('Botanischer Garten München-Nymphenburg'). Details are given under MVV Fahrplanauskunft.
• From Munich main station (duration about 30 min): Start at 'Hauptbahnhof Süd' by taking bus 17 to 'Amalienburgstraße'. There is a bus every 10 min. Get of the bus at 'Botanischer Garten München-Nymphenburg'. Details are given under MVV Fahrplanauskunft.

WLAN: Snsb_IT_Center_4

Agenda

TOP 1 Status quo: data mobilisation (generation of new data, processing of historical data)

• Czech partners
  • number of records in PLADIAS: 605.000
  • number of records 2019 for Czech side: 20.000 (will be imported in spring)
  • in PLADIAS only data of Czech Republic and within a very small range outside the borders of Czech Republic can be managed; thus there are not very much datasets from Bavarian side kept in PLADIAS; SNSB IT-Center will get an export of data from Bavarian side as precise as possible due to license regulations
  • Further data not kept in PLADIAS from Bavarian sied (e. g. by M. Lepši & P. Lepši) is existing. They will be prepared and delivered to Marcel (CC: Tanja Weibulat and Wolfgang Diewald). They could be provided as shown in PLADIAS template tables.

• Bavarian partners
  • number of records in DiversityCollection: 316.000 (< 12.000 with point coordinates)
  • number of records 2019 for the Bavarian forest region (FSG project): 7490, all with point coordinates; incl. 496 from Czech side; Czech data will be exported and given to Milan Štech and Zdenek Kaplan, they will not be imported in PLADIAS, but visualized in the common maps)
  • number of records 2019 for the Bavarian forest region (Klotz, ...): ?
  • number of historical records to be processed in 2020 (Nationalpark Bayerischer Wald): 50.000
  • number of historical records to be quality-improved in 2020 (Florein database Diewald --> updating existing records): 80.000

TOP 2 Status quo: occurrence data processing until data provision

(technical improvements, ABCD mapping, withhold of data not assigned to taxref-numbers)

• Czech partners

• Bavarian partners
  • In the future only taxa which are hosted in BFLnames will be exported. The suggestion of Petr Novotny to provide an export only with data converted to accepted names, would make a separate export necessary.
  • “Unschärfe” (indistinctness?) will be exported in future; it will be shown in exact value (meters) and as text (value for quadrant) ###eigentlich geht es hier um die Genauikeit von Punktkoordinaten einerseits und die Quadranten-Unschärfe andererseits###
  • as an example of “Unschärfe” concerning quadrants see Daten der Biotopkartierung
  • accuracy of coordinates

TOP 3 Status quo: on management of taxonomic backbones

(challenge: names with p.p. concepts (1.400 datasets); consensus backbone necessary? Who is hosting the consensus backbone for PLADIAS map presentation?)

• Czech partners

• Bavarian partners
  • number of BFL taxref entities for the Bavarian forest region: 1736 accepted names (1255 on species rank)

TOP 4 Status quo: on common web presentation of the project

• http://www.florasilvaegabretae.eu/

TOP 5 Status quo: "in situ" floristic status categories and processing

• Czech partners

• Bavarian partners
  • see "translation" table under "Useful links", improvement of processing and documentation planned

TOP 6 To Dos and priorities incl. concept for a data paper?

AOB

(Internal) documentation of FSG related data pipelines and data flows?

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Minutes

Responsible for minutes: Wolfgang Diewald, Marcel Ruff

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Useful links

• FSG-Treffen 19-04-12: last project meeting of Bavarian FSG partners
• https://fsg.ibot.cas.cz/map/fsg/ (with login)
• http://www.florasilvaegabretae.eu/
• How to use the DWB REST Webservice for Taxon Lists (e.g., with "ex situ" floristic status for Bavaria)
• DWB BioCASe Data Pipeline with
  • http://biocase.snsb.info/wrapper/downloads/BFLportal01coll/ = occurrence data mobilised by the "AG Flora von Bayern" and provided by the SNSB; see http://biocase.snsb.info/wrapper/dsa_info.cgi?dsa=BFLportal01coll (e.g., with "in situ" floristic status: original and processed)
  • http://biocase.snsb.info/wrapper/downloads/BFLportal04coll/ = occurrence data generated by the Bavarian environmental agency "LfU" and provided by the SNSB; see http://biocase.snsb.info/wrapper/dsa_info.cgi?dsa=BFLportal04coll
• ABCD 2.1 schema
• Floristic Status: Categories in DiversityCollection and PLADIAS
• Data flow of occurrence data in the Flora of Bavaria context
• Daten der Biotopkartierung des Bayerischen Landesamts für Umwelt für die Flora von Bayern, calculations to aggregate shape data from biotope monitoring projects and visualise them as central points in MTB/Q grid rasters
• Biodiversity Data Journal Data Papers
• DiversityDescriptions; see also Heilpflanzen-Quiz, DEEMY and LIAS

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